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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15960 and 15961 are separated by 192 nucleotides
15961 and 15962 are separated by 290 nucleotides
15962 and 15963 are separated by 252 nucleotides
15963 and 15964 are separated by 56 nucleotides
mRNA_7592: 15960 - Hypothetical Protein, at 636,503 to 637,419
15960
mRNA_7593: 15961 - K15631 ABA3 molybdenum cofactor sulfurtransferase, at 637,612 to 640,700
15961
mRNA_7594: 15962 - K00106 XDH xanthine dehydrogenase/oxidase, at 640,991 to 646,168
15962
mRNA_7595: 15963 - K02151 ATPeV1F, ATP6S14 V-type H+-transporting ATPase subunit F, at 646,421 to 647,106
15963
mRNA_7596: 15964 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 647,163 to 648,088
15964
Group
Condition
mRNA
_7592
mRNA
_7593
mRNA
_7594
mRNA
_7595
mRNA
_7596
15960
15961
15962
15963
15964
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
+0.1
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
+0.0
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.0
-0.0
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
+0.0
N.D.
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
+0.2
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
-0.1
N.D.
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.4
+0.2
N.D.
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
-0.0
N.D.
+0.1
growth on ypd
YPD
N.D.
+0.1
-0.2
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
-0.1
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.4
+0.1
N.D.
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
+0.1
N.D.
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
-0.1
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
-0.1
N.D.
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
+0.3
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.0
N.D.
+0.3
auxotrophy
YNB Glucose
N.D.
+0.4
+0.1
N.D.
+0.2
auxotrophy
Dropout Complete
N.D.
+0.3
+0.1
N.D.
+0.4
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
+0.1
N.D.
+0.5
growth on oleic acid
YNB Glucose
N.D.
-0.0
+0.2
N.D.
+0.6
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.5
+0.1
N.D.
+0.4
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