Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15962 and 15963 are separated by 252 nucleotides15963 and 15964 are separated by 56 nucleotides15964 and 15965 are separated by 173 nucleotides15965 and 15966 are separated by 237 nucleotides mRNA_7594: 15962 - K00106 XDH xanthine dehydrogenase/oxidase, at 640,991 to 646,168 15962 mRNA_7595: 15963 - K02151 ATPeV1F, ATP6S14 V-type H+-transporting ATPase subunit F, at 646,421 to 647,106 15963 mRNA_7596: 15964 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 647,163 to 648,088 15964 mRNA_7597: 15965 - Hypothetical Protein, at 648,262 to 649,679 15965 mRNA_7598: 15966 - K01102 PDP pyruvate dehydrogenase phosphatase, at 649,917 to 652,257 15966
Group Condition mRNA_7594 mRNA_7595 mRNA_7596 mRNA_7597 mRNA_7598
15962 15963 15964 15965 15966
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.3 -1.8 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. +0.3 -1.3 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.2 -0.6 -0.3
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.3 -0.9 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.1 -0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. +0.0 -0.8 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. -0.2 -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.1 +0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. +0.3 -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.4 -0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.2 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. +0.2 -0.7 +0.2
auxotrophy YNB Glucose +0.1 N.D. +0.2 -0.4 +0.0
auxotrophy Dropout Complete +0.1 N.D. +0.4 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. +0.0 +0.2 -0.0
growth on ypd YPD -0.2 N.D. +0.3 +0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.4 -0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.5 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. +0.0 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.4 +1.1 -0.3
growth on oleic acid YNB Glucose +0.2 N.D. +0.6 +0.1 +0.1
remove
mRNA_7594
plot
remove
mRNA_7595
plot
remove
mRNA_7596
remove
mRNA_7597
plot
remove
mRNA_7598
plot