Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15964 and 15965 are separated by 173 nucleotides15965 and 15966 are separated by 237 nucleotides15966 and 15967 are separated by 272 nucleotides15967 and 15968 are separated by 300 nucleotides mRNA_7596: 15964 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 647,163 to 648,088 15964 mRNA_7597: 15965 - Hypothetical Protein, at 648,262 to 649,679 15965 mRNA_7598: 15966 - K01102 PDP pyruvate dehydrogenase phosphatase, at 649,917 to 652,257 15966 mRNA_7599: 15967 - K01900 LSC2 succinyl-CoA synthetase beta subunit, at 652,530 to 654,489 15967 mRNA_7600: 15968 - K00010 iolG myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase, at 654,790 to 656,500 15968
Group Condition mRNA_7596 mRNA_7597 mRNA_7598 mRNA_7599 mRNA_7600
15964 15965 15966 15967 15968
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -1.8 -0.0 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.6 -0.3 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -1.3 -0.4 N.D. +0.3
growth on ricinoleic acid YNB Glucose +0.3 -0.9 -0.4 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.4 -0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 +0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 -0.4 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.8 +0.4 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.7 +0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.4 -0.2 N.D. +0.0
auxotrophy Dropout Complete +0.4 -0.2 -0.3 N.D. -0.1
auxotrophy YNB Glucose +0.2 -0.4 +0.0 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.3 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.3 -0.2 N.D. +0.1
growth on ypd YPD +0.3 +0.3 -0.0 N.D. -0.5
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.2 +0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 -0.0 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.5 +0.1 -0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +1.1 -0.3 N.D. +0.1
growth on oleic acid YNB Glucose +0.6 +0.1 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.4 +0.0 N.D. +0.4
remove
mRNA_7596
plot
remove
mRNA_7597
plot
remove
mRNA_7598
remove
mRNA_7599
plot
remove
mRNA_7600
plot