Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15965 and 15966 are separated by 237 nucleotides15966 and 15967 are separated by 272 nucleotides15967 and 15968 are separated by 300 nucleotides15968 and 15969 are separated by 387 nucleotides mRNA_7597: 15965 - Hypothetical Protein, at 648,262 to 649,679 15965 mRNA_7598: 15966 - K01102 PDP pyruvate dehydrogenase phosphatase, at 649,917 to 652,257 15966 mRNA_7599: 15967 - K01900 LSC2 succinyl-CoA synthetase beta subunit, at 652,530 to 654,489 15967 mRNA_7600: 15968 - K00010 iolG myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase, at 654,790 to 656,500 15968 mRNA_7601: 15969 - K09521 DNAJC1 DnaJ homolog subfamily C member 1, at 656,888 to 658,260 15969
Group Condition mRNA_7597 mRNA_7598 mRNA_7599 mRNA_7600 mRNA_7601
15965 15966 15967 15968 15969
ypd buoyancy 40 hrs No Buoyancy Separation -1.8 -0.0 N.D. -0.3 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 -0.4 N.D. +0.3 -0.3
growth on ricinoleic acid YNB Glucose -0.9 -0.4 N.D. +0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.7 +0.2 N.D. +0.1 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.3 N.D. +0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 N.D. +0.0 -0.4
auxotrophy Dropout Complete -0.2 -0.3 N.D. -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.3 N.D. -0.3 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.4 N.D. -0.1 -0.3
auxotrophy YNB Glucose -0.4 +0.0 N.D. -0.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 N.D. -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 N.D. +0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.8 +0.4 N.D. +0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 N.D. -0.1 +0.1
growth on ypd YPD +0.3 -0.0 N.D. -0.5 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.1 N.D. -0.0 +0.0
growth on oleic acid YNB Glucose +0.1 +0.1 N.D. -0.2 -0.0
growth on oleic acid YNB Oleic Acid +0.1 -0.3 N.D. +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.0 N.D. +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.1 -0.3 N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.0 N.D. +0.4 +0.0
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