Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15966 and 15967 are separated by 272 nucleotides15967 and 15968 are separated by 300 nucleotides15968 and 15969 are separated by 387 nucleotides15969 and 15970 are separated by 320 nucleotides mRNA_7598: 15966 - K01102 PDP pyruvate dehydrogenase phosphatase, at 649,917 to 652,257 15966 mRNA_7599: 15967 - K01900 LSC2 succinyl-CoA synthetase beta subunit, at 652,530 to 654,489 15967 mRNA_7600: 15968 - K00010 iolG myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase, at 654,790 to 656,500 15968 mRNA_7601: 15969 - K09521 DNAJC1 DnaJ homolog subfamily C member 1, at 656,888 to 658,260 15969 mRNA_7602: 15970 - Hypothetical Protein, at 658,581 to 659,564 15970
Group Condition mRNA_7598 mRNA_7599 mRNA_7600 mRNA_7601 mRNA_7602
15966 15967 15968 15969 15970
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. -0.3 -0.8 -0.3
growth on ypd YPD -0.0 N.D. -0.5 -0.0 -0.7
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. -0.1 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +0.1 -0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. +0.0 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. -0.1 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. +0.1 -0.6 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. +0.3 -0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.0 -0.4 +0.5
growth on oleic acid YNB Glucose +0.1 N.D. -0.2 -0.0 +0.2
auxotrophy Dropout Complete -0.3 N.D. -0.1 -0.3 +0.7
growth on ricinoleic acid YNB Glucose -0.4 N.D. +0.0 +0.0 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.3 +0.3 +0.4
auxotrophy YNB Glucose +0.0 N.D. -0.0 -0.4 +0.6
growth on oleic acid YNB Oleic Acid -0.3 N.D. +0.0 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.1 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. +0.4 +0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.1 +0.0 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. +0.1 +0.2 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. +0.0 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.0 +0.0 +0.7
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