Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15967 and 15968 are separated by 300 nucleotides15968 and 15969 are separated by 387 nucleotides15969 and 15970 are separated by 320 nucleotides15970 and 15971 are separated by 711 nucleotides mRNA_7599: 15967 - K01900 LSC2 succinyl-CoA synthetase beta subunit, at 652,530 to 654,489 15967 mRNA_7600: 15968 - K00010 iolG myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase, at 654,790 to 656,500 15968 mRNA_7601: 15969 - K09521 DNAJC1 DnaJ homolog subfamily C member 1, at 656,888 to 658,260 15969 mRNA_7602: 15970 - Hypothetical Protein, at 658,581 to 659,564 15970 mRNA_7603: 15971 - SUPERFAMILY--SSF54427, at 660,276 to 661,317 15971
Group Condition mRNA_7599 mRNA_7600 mRNA_7601 mRNA_7602 mRNA_7603
15967 15968 15969 15970 15971
growth on ypd YPD N.D. -0.5 -0.0 -0.7 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 -0.8 -0.3 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.3 -0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.6 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 -0.4 +0.5 -0.7
auxotrophy YNB Glucose N.D. -0.0 -0.4 +0.6 -0.7
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.1 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.3 -0.3 +0.2
auxotrophy Dropout Complete N.D. -0.1 -0.3 +0.7 -0.5
growth on oleic acid YNB Glucose N.D. -0.2 -0.0 +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 -0.3 +0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 -0.3 -0.1 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 +0.3 +0.4 -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 +0.0 +0.7 -0.5
growth on oleic acid YNB Oleic Acid N.D. +0.0 +0.1 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 +0.0 -0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 +0.1 +0.2 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.0 +0.0 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.1 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.2 +0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.0 +0.6 +0.1
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