Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15968 and 15969 are separated by 387 nucleotides15969 and 15970 are separated by 320 nucleotides15970 and 15971 are separated by 711 nucleotides15971 and 15972 are separated by 251 nucleotides mRNA_7600: 15968 - K00010 iolG myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase, at 654,790 to 656,500 15968 mRNA_7601: 15969 - K09521 DNAJC1 DnaJ homolog subfamily C member 1, at 656,888 to 658,260 15969 mRNA_7602: 15970 - Hypothetical Protein, at 658,581 to 659,564 15970 mRNA_7603: 15971 - SUPERFAMILY--SSF54427, at 660,276 to 661,317 15971 mRNA_7604: 15972 - K09549 PFDN2 prefoldin subunit 2, at 661,569 to 662,288 15972
Group Condition mRNA_7600 mRNA_7601 mRNA_7602 mRNA_7603 mRNA_7604
15968 15969 15970 15971 15972
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.8 -0.3 +0.0 -1.5
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 -0.3 +0.1 -1.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 -0.3 +0.2 -1.7
growth on ypd YPD -0.5 -0.0 -0.7 -0.5 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.2 +0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.3 +0.2 -0.2 -0.5
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.4 +0.5 -0.7 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.3 +0.4 -0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.3 -0.1 +0.4 -0.1
growth on oleic acid YNB Glucose -0.2 -0.0 +0.2 -0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.0 +0.0 +0.5 +0.1 -0.6
auxotrophy YNB Glucose -0.0 -0.4 +0.6 -0.7 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.0 -0.0 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 +0.3 +0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 +0.3 +0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 +0.2 +0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 +0.6 +0.1 -0.4
auxotrophy Dropout Complete -0.1 -0.3 +0.7 -0.5 +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.6 +0.1 -0.1 +1.2
growth on oleic acid YNB Oleic Acid +0.0 +0.1 +0.4 -0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.0 +0.7 -0.5 +0.6
remove
mRNA_7600
plot
remove
mRNA_7601
plot
remove
mRNA_7602
remove
mRNA_7603
plot
remove
mRNA_7604
plot