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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15968 and 15969 are separated by 387 nucleotides
15969 and 15970 are separated by 320 nucleotides
15970 and 15971 are separated by 711 nucleotides
15971 and 15972 are separated by 251 nucleotides
mRNA_7600: 15968 - K00010 iolG myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase, at 654,790 to 656,500
15968
mRNA_7601: 15969 - K09521 DNAJC1 DnaJ homolog subfamily C member 1, at 656,888 to 658,260
15969
mRNA_7602: 15970 - Hypothetical Protein, at 658,581 to 659,564
15970
mRNA_7603: 15971 - SUPERFAMILY--SSF54427, at 660,276 to 661,317
15971
mRNA_7604: 15972 - K09549 PFDN2 prefoldin subunit 2, at 661,569 to 662,288
15972
Group
Condition
mRNA
_7600
mRNA
_7601
mRNA
_7602
mRNA
_7603
mRNA
_7604
15968
15969
15970
15971
15972
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.8
-0.3
+0.0
-1.5
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.3
-0.3
+0.1
-1.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.3
-0.3
+0.2
-1.7
growth on ypd
YPD
-0.5
-0.0
-0.7
-0.5
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.2
+0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.3
+0.2
-0.2
-0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.4
+0.5
-0.7
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.3
+0.4
-0.4
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.3
-0.1
+0.4
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.0
+0.2
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.0
+0.0
+0.5
+0.1
-0.6
auxotrophy
YNB Glucose
-0.0
-0.4
+0.6
-0.7
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
+0.0
-0.0
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
+0.3
+0.2
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
+0.3
+0.3
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.1
+0.2
+0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.0
+0.6
+0.1
-0.4
auxotrophy
Dropout Complete
-0.1
-0.3
+0.7
-0.5
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.6
+0.1
-0.1
+1.2
growth on oleic acid
YNB Oleic Acid
+0.0
+0.1
+0.4
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.0
+0.7
-0.5
+0.6
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