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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15970 and 15971 are separated by 711 nucleotides
15971 and 15972 are separated by 251 nucleotides
15972 and 15973 are separated by 249 nucleotides
15973 and 15974 are separated by 417 nucleotides
mRNA_7602: 15970 - Hypothetical Protein, at 658,581 to 659,564
15970
mRNA_7603: 15971 - SUPERFAMILY--SSF54427, at 660,276 to 661,317
15971
mRNA_7604: 15972 - K09549 PFDN2 prefoldin subunit 2, at 661,569 to 662,288
15972
mRNA_7605: 15973 - K03941 NDUFS8 NADH dehydrogenase (ubiquinone) Fe-S protein 8, at 662,538 to 663,838
15973
mRNA_7606: 15974 - Hypothetical Protein, at 664,256 to 665,164
15974
Group
Condition
mRNA
_7602
mRNA
_7603
mRNA
_7604
mRNA
_7605
mRNA
_7606
15970
15971
15972
15973
15974
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.0
-1.5
N.D.
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
-1.6
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.2
-1.7
N.D.
-0.2
growth on ypd
YPD
-0.7
-0.5
+0.0
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
-0.5
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.2
-0.5
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.2
-0.4
N.D.
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.2
-0.2
N.D.
-0.6
growth on ricinoleic acid
YNB Glucose
+0.5
+0.1
-0.6
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.4
-0.3
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.2
-0.6
N.D.
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.4
-0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.5
-0.7
+0.2
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.3
-0.4
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
+0.1
-0.4
N.D.
-0.2
growth on oleic acid
YNB Glucose
+0.2
-0.1
+0.1
N.D.
-0.1
auxotrophy
YNB Glucose
+0.6
-0.7
+0.5
N.D.
-0.2
auxotrophy
Dropout Complete
+0.7
-0.5
+0.6
N.D.
-0.5
growth on oleic acid
YNB Oleic Acid
+0.4
-0.1
+0.2
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.7
-0.5
+0.6
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.1
+1.2
N.D.
-0.1
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