Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15973 and 15974 are separated by 417 nucleotides
15974 and 15975 are separated by 244 nucleotides
15975 and 15976 are separated by 276 nucleotides
15976 and 15977 are separated by 65 nucleotides
mRNA_7605: 15973 - K03941 NDUFS8 NADH dehydrogenase (ubiquinone) Fe-S protein 8, at 662,538 to 663,838
15973
mRNA_7606: 15974 - Hypothetical Protein, at 664,256 to 665,164
15974
mRNA_7607: 15975 - BLAST UPF0428 CXorf56-like protein, putative [Rhizoctonia s..., at 665,409 to 666,288
15975
mRNA_7608: 15976 - K10847 XPA DNA-repair protein complementing XP-A cells, at 666,565 to 667,853
15976
mRNA_7609: 15977 - KOG3239 Density-regulated protein related to translation initiation factor 1 (eIF-1/SUI1), at 667,919 to 668,964
15977
Group
Condition
mRNA
_7605
mRNA
_7606
mRNA
_7607
mRNA
_7608
mRNA
_7609
15973
15974
15975
15976
15977
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
+0.2
-0.9
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.6
+0.2
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.0
-0.6
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
-0.4
-0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.4
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
-0.4
-0.0
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.1
+0.1
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
-0.3
+0.3
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
+0.0
-0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
+0.1
+0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.2
+0.1
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
-0.1
+0.1
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
+0.3
-0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
+0.2
-0.0
N.D.
auxotrophy
Dropout Complete
N.D.
-0.5
+0.3
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
+0.2
+0.1
N.D.
growth on ypd
YPD
N.D.
-0.3
-0.1
+0.6
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
+0.4
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
+0.3
-0.2
N.D.
auxotrophy
YNB Glucose
N.D.
-0.2
+0.4
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.1
+0.3
N.D.
remove
mRNA_7605
plot
remove
mRNA_7606
plot
remove
mRNA_7607
remove
mRNA_7608
plot
remove
mRNA_7609
plot