Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15975 and 15976 are separated by 276 nucleotides15976 and 15977 are separated by 65 nucleotides15977 and 15978 are separated by 353 nucleotides15978 and 15979 are separated by 361 nucleotides mRNA_7607: 15975 - BLAST UPF0428 CXorf56-like protein, putative [Rhizoctonia s..., at 665,409 to 666,288 15975 mRNA_7608: 15976 - K10847 XPA DNA-repair protein complementing XP-A cells, at 666,565 to 667,853 15976 mRNA_7609: 15977 - KOG3239 Density-regulated protein related to translation initiation factor 1 (eIF-1/SUI1), at 667,919 to 668,964 15977 mRNA_7610: 15978 - KOG0548 Molecular co-chaperone STI1, at 669,318 to 671,371 15978 mRNA_7611: 15979 - KOG4779 Predicted membrane protein, at 671,733 to 672,150 15979
Group Condition mRNA_7607 mRNA_7608 mRNA_7609 mRNA_7610 mRNA_7611
15975 15976 15977 15978 15979
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 N.D. -1.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.1 N.D. -0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.9 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.0 N.D. -0.7 N.D.
growth on oleic acid YNB Glucose +0.1 -0.5 N.D. -0.6 N.D.
growth on oleic acid YNB Oleic Acid +0.0 -0.2 N.D. -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.4 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.3 N.D. -0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.2 N.D. -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 N.D. -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.1 N.D. +0.3 N.D.
growth on ypd YPD -0.1 +0.6 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 N.D. -0.2 N.D.
auxotrophy Dropout Complete +0.3 +0.2 N.D. -0.4 N.D.
growth on ricinoleic acid YNB Glucose +0.3 -0.0 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.1 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 N.D. +0.1 N.D.
auxotrophy YNB Glucose +0.4 +0.1 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.0 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.3 N.D. +0.3 N.D.
remove
mRNA_7607
plot		 remove
mRNA_7608
plot		 remove
mRNA_7609		 remove
mRNA_7610
plot		 remove
mRNA_7611
plot