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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15984 and 15985 are separated by 597 nucleotides
15985 and 15986 are separated by 1788 nucleotides
15986 and 15987 are separated by 186 nucleotides
15987 and 15988 are separated by 889 nucleotides
mRNA_7616: 15984 - K00706 E2.4.1.34 1,3-beta-glucan synthase, at 684,881 to 690,807
15984
mRNA_7617: 15985 - Hypothetical Protein, at 691,405 to 692,628
15985
mRNA_7618: 15986 - K14549 UTP15 U3 small nucleolar RNA-associated protein 15, at 694,417 to 696,381
15986
mRNA_7619: 15987 - Interpro NADH-ubiquinone oxidoreductase MWFE subunit 0, at 696,568 to 697,325
15987
mRNA_7620: 15988 - Hypothetical Protein, at 698,215 to 700,242
15988
Group
Condition
mRNA
_7616
mRNA
_7617
mRNA
_7618
mRNA
_7619
mRNA
_7620
15984
15985
15986
15987
15988
growth on ypd
YPD
N.D.
-0.2
N.D.
N.D.
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
N.D.
N.D.
-0.4
auxotrophy
YNB Glucose
N.D.
+0.1
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.2
N.D.
N.D.
-0.3
auxotrophy
Dropout Complete
N.D.
+0.3
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
N.D.
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
N.D.
N.D.
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
N.D.
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
N.D.
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
N.D.
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
N.D.
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
N.D.
N.D.
+0.4
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
N.D.
N.D.
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
N.D.
N.D.
+0.7
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.2
N.D.
N.D.
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
N.D.
N.D.
+0.5
growth on oleic acid
YNB Glucose
N.D.
-0.2
N.D.
N.D.
+1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.0
N.D.
N.D.
+1.0
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