Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15991 and 15992 are separated by 626 nucleotides15992 and 15993 are separated by 177 nucleotides15993 and 15994 are separated by 469 nucleotides15994 and 15995 are separated by 172 nucleotides mRNA_7623: 15991 - K19564 CTR, HNM1 choline transport protein, at 704,159 to 706,103 15991 mRNA_7624: 15992 - KOG1535 Predicted fumarylacetoacetate hydralase, at 706,730 to 707,973 15992 mRNA_7625: 15993 - HMMPfam-Hypoxia induced protein conserved region-PF04588,ProSiteProfiles-HIG1 domain profile.-PS51503, at 708,151 to 709,093 15993 mRNA_7626: 15994 - K00273 DAO, aao D-amino-acid oxidase, at 709,563 to 711,029 15994 mRNA_7627: 15995 - K01273 DPEP membrane dipeptidase, at 711,202 to 712,775 15995
Group Condition mRNA_7623 mRNA_7624 mRNA_7625 mRNA_7626 mRNA_7627
15991 15992 15993 15994 15995
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.5 -0.6 -0.4 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2 -0.3 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.2 -0.2 +0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 -0.4 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.4 +0.4 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.3 -0.2 -0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.0 +0.0 -0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.1 -0.1 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.1 -0.5 +0.2 +0.4
auxotrophy Dropout Complete +0.1 -0.2 +0.3 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 -0.5 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 +0.5 +0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.3 -0.4 -0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.1 +0.3 -0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.1 -0.6 +0.0 +0.8
growth on ricinoleic acid YNB Glucose +0.3 -0.3 +0.4 -0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.0 +0.4 -0.2 +0.3
growth on oleic acid YNB Glucose +0.1 +0.1 +0.7 -0.0 +0.0
auxotrophy YNB Glucose +0.0 -0.2 +0.6 -0.0 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.3 +0.4 +0.5 +0.1
growth on ypd YPD -0.0 -0.1 +0.2 -0.0 +1.0
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