Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15992 and 15993 are separated by 177 nucleotides15993 and 15994 are separated by 469 nucleotides15994 and 15995 are separated by 172 nucleotides15995 and 15996 are separated by 87 nucleotides mRNA_7624: 15992 - KOG1535 Predicted fumarylacetoacetate hydralase, at 706,730 to 707,973 15992 mRNA_7625: 15993 - HMMPfam-Hypoxia induced protein conserved region-PF04588,ProSiteProfiles-HIG1 domain profile.-PS51503, at 708,151 to 709,093 15993 mRNA_7626: 15994 - K00273 DAO, aao D-amino-acid oxidase, at 709,563 to 711,029 15994 mRNA_7627: 15995 - K01273 DPEP membrane dipeptidase, at 711,202 to 712,775 15995 mRNA_7628: 15996 - KOG1721 FOG Zn-finger, at 712,863 to 715,455 15996
Group Condition mRNA_7624 mRNA_7625 mRNA_7626 mRNA_7627 mRNA_7628
15992 15993 15994 15995 15996
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.6 -0.4 -0.5 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.4 -0.4 +0.2 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 -0.2 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2 +0.2 -0.4 -0.2
growth on oleic acid YNB Oleic Acid +0.0 +0.0 -0.3 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.4 -0.0 +0.3 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 -0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.4 +0.0 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.2 -0.2 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.5 -0.1 +0.4 -0.1
auxotrophy Dropout Complete -0.2 +0.3 +0.1 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 -0.1 +0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5 +0.2 +0.4 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.6 +0.0 +0.8 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.4 -0.2 +0.3 -0.0
growth on ypd YPD -0.1 +0.2 -0.0 +1.0 -0.6
growth on ricinoleic acid YNB Glucose -0.3 +0.4 -0.1 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.5 +0.3 -0.1 +0.1
growth on oleic acid YNB Glucose +0.1 +0.7 -0.0 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.4 +0.5 +0.1 +0.0
auxotrophy YNB Glucose -0.2 +0.6 -0.0 +0.5 +0.0
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