Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15992 and 15993 are separated by 177 nucleotides
15993 and 15994 are separated by 469 nucleotides
15994 and 15995 are separated by 172 nucleotides
15995 and 15996 are separated by 87 nucleotides
mRNA_7624: 15992 - KOG1535 Predicted fumarylacetoacetate hydralase, at 706,730 to 707,973
15992
mRNA_7625: 15993 - HMMPfam-Hypoxia induced protein conserved region-PF04588,ProSiteProfiles-HIG1 domain profile.-PS51503, at 708,151 to 709,093
15993
mRNA_7626: 15994 - K00273 DAO, aao D-amino-acid oxidase, at 709,563 to 711,029
15994
mRNA_7627: 15995 - K01273 DPEP membrane dipeptidase, at 711,202 to 712,775
15995
mRNA_7628: 15996 - KOG1721 FOG Zn-finger, at 712,863 to 715,455
15996
Group
Condition
mRNA
_7624
mRNA
_7625
mRNA
_7626
mRNA
_7627
mRNA
_7628
15992
15993
15994
15995
15996
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
-0.6
-0.4
-0.5
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.4
-0.4
+0.2
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.3
-0.2
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.2
+0.2
-0.4
-0.2
growth on oleic acid
YNB Oleic Acid
+0.0
+0.0
-0.3
-0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.4
-0.0
+0.3
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
-0.1
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.4
+0.0
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.2
-0.2
+0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.5
-0.1
+0.4
-0.1
auxotrophy
Dropout Complete
-0.2
+0.3
+0.1
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.3
-0.1
+0.4
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.5
+0.2
+0.4
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.6
+0.0
+0.8
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.4
-0.2
+0.3
-0.0
growth on ypd
YPD
-0.1
+0.2
-0.0
+1.0
-0.6
growth on ricinoleic acid
YNB Glucose
-0.3
+0.4
-0.1
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.5
+0.3
-0.1
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.7
-0.0
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.4
+0.5
+0.1
+0.0
auxotrophy
YNB Glucose
-0.2
+0.6
-0.0
+0.5
+0.0
remove
mRNA_7624
plot
remove
mRNA_7625
plot
remove
mRNA_7626
remove
mRNA_7627
plot
remove
mRNA_7628
plot