Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15997 and 15998 are separated by 105 nucleotides15998 and 15999 are separated by 121 nucleotides15999 and 16000 are separated by 801 nucleotides16000 and 16001 are separated by 171 nucleotides mRNA_7629: 15997 - K20474 RINT1, TIP20 RAD50-interacting protein 1, at 715,585 to 720,215 15997 mRNA_7630: 15998 - K11353 NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13, at 720,321 to 721,070 15998 mRNA_7631: 15999 - KOG0226 RNA-binding proteins, at 721,192 to 722,141 15999 mRNA_7632: 16000 - KOG0383 Predicted helicase, at 722,943 to 730,457 16000 mRNA_7633: 16001 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 730,629 to 733,694 16001
Group Condition mRNA_7629 mRNA_7630 mRNA_7631 mRNA_7632 mRNA_7633
15997 15998 15999 16000 16001
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. -3.0 -0.3 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -1.3 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.4 -1.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -1.1 -0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -1.4 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -1.0 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 N.D. -0.6 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. -1.1 -0.2 +0.2
auxotrophy YNB Glucose -0.3 N.D. -0.3 +0.1 -0.2
auxotrophy Dropout Complete -0.3 N.D. +0.2 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.2 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. -0.1 -0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.7 -0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. -0.1 +0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. +0.1 -0.5 +0.2
growth on ypd YPD +0.0 N.D. +0.2 -0.1 -0.2
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.2 -0.4 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. +0.4 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.0 +0.0 -0.1
growth on oleic acid YNB Glucose +0.2 N.D. -0.2 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. +0.1 +0.2 +0.1
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