Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15999 and 16000 are separated by 801 nucleotides16000 and 16001 are separated by 171 nucleotides16001 and 16002 are separated by 460 nucleotides16002 and 16003 are separated by 451 nucleotides mRNA_7631: 15999 - KOG0226 RNA-binding proteins, at 721,192 to 722,141 15999 mRNA_7632: 16000 - KOG0383 Predicted helicase, at 722,943 to 730,457 16000 mRNA_7633: 16001 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 730,629 to 733,694 16001 mRNA_7634: 16002 - HMMPfam-Protein of unknown function (DUF1264)-PF06884, at 734,155 to 735,362 16002 mRNA_7635: 16003 - K02865 RP-L10Ae, RPL10A large subunit ribosomal protein L10Ae, at 735,814 to 737,148 16003
Group Condition mRNA_7631 mRNA_7632 mRNA_7633 mRNA_7634 mRNA_7635
15999 16000 16001 16002 16003
growth on ricinoleic acid YNB Ricinoleic Acid -3.0 -0.3 +0.3 -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -0.1 +0.1 -1.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.3 -0.2 -0.5 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -1.0 -0.1 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 -0.2 +0.2 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.1 -0.1 -0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy -1.0 -0.0 -0.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -1.1 -0.2 -0.0 +0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.7 -0.0 +0.2 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 -0.2 +0.1 N.D.
growth on oleic acid YNB Glucose -0.2 -0.0 +0.2 -0.4 N.D.
growth on ypd YPD +0.2 -0.1 -0.2 -0.1 N.D.
auxotrophy YNB Glucose -0.3 +0.1 -0.2 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.4 +0.0 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.0 -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.0 -0.2 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.0 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.5 +0.2 +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 +0.1 +0.3 N.D.
auxotrophy Dropout Complete +0.2 -0.1 -0.3 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 +0.1 +0.1 N.D.
remove
mRNA_7631
plot
remove
mRNA_7632
plot
remove
mRNA_7633
remove
mRNA_7634
plot
remove
mRNA_7635
plot