Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16000 and 16001 are separated by 171 nucleotides16001 and 16002 are separated by 460 nucleotides16002 and 16003 are separated by 451 nucleotides16003 and 16004 are separated by 945 nucleotides mRNA_7632: 16000 - KOG0383 Predicted helicase, at 722,943 to 730,457 16000 mRNA_7633: 16001 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 730,629 to 733,694 16001 mRNA_7634: 16002 - HMMPfam-Protein of unknown function (DUF1264)-PF06884, at 734,155 to 735,362 16002 mRNA_7635: 16003 - K02865 RP-L10Ae, RPL10A large subunit ribosomal protein L10Ae, at 735,814 to 737,148 16003 mRNA_7636: 16004 - Hypothetical Protein, at 738,094 to 740,941 16004
Group Condition mRNA_7632 mRNA_7633 mRNA_7634 mRNA_7635 mRNA_7636
16000 16001 16002 16003 16004
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.0 -0.1 -0.0 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.1 -1.1 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 -0.5 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 -0.3 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.2 -0.3 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 -0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.2 -0.3 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.1 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 +0.1 N.D. -0.0
growth on ypd YPD -0.1 -0.2 -0.1 N.D. +0.3
auxotrophy Dropout Complete -0.1 -0.3 +0.5 N.D. -0.2
growth on oleic acid YNB Oleic Acid -0.4 +0.0 -0.0 N.D. +0.3
growth on ricinoleic acid YNB Glucose -0.0 +0.2 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 +0.0 N.D. -0.1
auxotrophy YNB Glucose +0.1 -0.2 +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0 +0.3 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.3 -0.0 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.2 +0.5 N.D. +0.1
growth on oleic acid YNB Glucose -0.0 +0.2 -0.4 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 +0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 +0.3 N.D. +0.1
remove
mRNA_7632
plot
remove
mRNA_7633
plot
remove
mRNA_7634
remove
mRNA_7635
plot
remove
mRNA_7636
plot