Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16005 and 16006 are separated by 173 nucleotides16006 and 16007 are separated by 827 nucleotides16007 and 16008 are separated by 397 nucleotides16008 and 16009 are separated by 250 nucleotides mRNA_7637: 16005 - K12197 CHMP1, VPS46, DID2 charged multivesicular body protein 1, at 741,048 to 741,985 16005 mRNA_7638: 16006 - HMMPfam-Subunit 17 of Mediator complex-PF10156, at 742,159 to 744,441 16006 mRNA_7639: 16007 - K11095 SNRPC U1 small nuclear ribonucleoprotein C, at 745,269 to 745,635 16007 mRNA_7640: 16008 - K12622 LSM3 U6 snRNA-associated Sm-like protein LSm3, at 746,033 to 746,457 16008 mRNA_7641: 16009 - Hypothetical Protein, at 746,708 to 747,858 16009
Group Condition mRNA_7637 mRNA_7638 mRNA_7639 mRNA_7640 mRNA_7641
16005 16006 16007 16008 16009
growth on ricinoleic acid YNB Methylricinoleic Acid -3.1 N.D. N.D. N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -2.1 N.D. N.D. N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.8 N.D. N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -2.1 N.D. N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose -2.6 N.D. N.D. N.D. +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.7 N.D. N.D. N.D. +0.1
auxotrophy YNB Glucose -1.8 N.D. N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine -1.6 N.D. N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.6 N.D. N.D. N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -1.1 N.D. N.D. N.D. -0.2
growth on oleic acid YNB Glucose -1.2 N.D. N.D. N.D. +0.3
auxotrophy Dropout Complete -0.6 N.D. N.D. N.D. -0.2
growth on ypd YPD -0.4 N.D. N.D. N.D. -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.8 N.D. N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. N.D. N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. N.D. N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.3 N.D. N.D. N.D. +0.6
ypd buoyancy 40 hrs Median Buoyancy +1.0 N.D. N.D. N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +1.1 N.D. N.D. N.D. +0.0
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