Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16008 and 16009 are separated by 250 nucleotides16009 and 16010 are separated by 192 nucleotides16010 and 16011 are separated by 427 nucleotides16011 and 16012 are separated by 363 nucleotides mRNA_7640: 16008 - K12622 LSM3 U6 snRNA-associated Sm-like protein LSm3, at 746,033 to 746,457 16008 mRNA_7641: 16009 - Hypothetical Protein, at 746,708 to 747,858 16009 mRNA_7642: 16010 - K06943 NOG1 nucleolar GTP-binding protein, at 748,051 to 750,365 16010 mRNA_7643: 16011 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 750,793 to 753,754 16011 mRNA_7644: 16012 - KOG0118 FOG RRM domain, at 754,118 to 756,054 16012
Group Condition mRNA_7640 mRNA_7641 mRNA_7642 mRNA_7643 mRNA_7644
16008 16009 16010 16011 16012
auxotrophy Dropout Complete N.D. -0.2 N.D. -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 N.D. -0.5 N.D.
growth on ypd YPD N.D. -0.4 N.D. +0.0 N.D.
auxotrophy YNB Glucose N.D. +0.2 N.D. -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 N.D. +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 N.D. -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 N.D. -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 N.D. -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 N.D. +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 N.D. +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 N.D. +0.4 N.D.
growth on oleic acid YNB Glucose N.D. +0.3 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 N.D. +0.3 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.6 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.4 N.D. +0.7 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.8 N.D. +0.4 N.D.
remove
mRNA_7640
plot		 remove
mRNA_7641
plot		 remove
mRNA_7642		 remove
mRNA_7643
plot		 remove
mRNA_7644
plot