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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16010 and 16011 are separated by 427 nucleotides
16011 and 16012 are separated by 363 nucleotides
16012 and 16013 are separated by 697 nucleotides
16013 and 16014 are separated by 38 nucleotides
mRNA_7642: 16010 - K06943 NOG1 nucleolar GTP-binding protein, at 748,051 to 750,365
16010
mRNA_7643: 16011 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 750,793 to 753,754
16011
mRNA_7644: 16012 - KOG0118 FOG RRM domain, at 754,118 to 756,054
16012
mRNA_7645: 16013 - K04794 PTH2 peptidyl-tRNA hydrolase, PTH2 family, at 756,752 to 757,515
16013
mRNA_7646: 16014 - Hypothetical Protein, at 757,554 to 759,024
16014
Group
Condition
mRNA
_7642
mRNA
_7643
mRNA
_7644
mRNA
_7645
mRNA
_7646
16010
16011
16012
16013
16014
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.5
N.D.
N.D.
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
N.D.
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
N.D.
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.4
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
N.D.
N.D.
-0.3
auxotrophy
Dropout Complete
N.D.
-0.5
N.D.
N.D.
+0.2
growth on ypd
YPD
N.D.
+0.0
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.0
N.D.
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.4
N.D.
N.D.
+0.2
auxotrophy
YNB Glucose
N.D.
-0.4
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
N.D.
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.0
N.D.
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.3
N.D.
N.D.
-0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.4
N.D.
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
N.D.
+0.4
N.D.
N.D.
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.4
N.D.
N.D.
+0.0
growth on oleic acid
YNB Glucose
N.D.
+0.2
N.D.
N.D.
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.7
N.D.
N.D.
+0.1
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