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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16022 and 16023 are separated by 389 nucleotides
16023 and 16024 are separated by 458 nucleotides
16024 and 16025 are separated by 241 nucleotides
16025 and 16026 are separated by 170 nucleotides
mRNA_7654: 16022 - K06911 K06911 uncharacterized protein, at 776,597 to 777,755
16022
mRNA_7655: 16023 - K12194 CHMP4, SNF7, VPS32 charged multivesicular body protein 4, at 778,145 to 779,164
16023
mRNA_7656: 16024 - Hypothetical Protein, at 779,623 to 780,980
16024
mRNA_7657: 16025 - KOG2743 Cobalamin synthesis protein, at 781,222 to 782,891
16025
mRNA_7658: 16026 - KOG1398 Uncharacterized conserved protein, at 783,062 to 785,466
16026
Group
Condition
mRNA
_7654
mRNA
_7655
mRNA
_7656
mRNA
_7657
mRNA
_7658
16022
16023
16024
16025
16026
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
N.D.
-0.4
-2.6
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
N.D.
-0.1
-1.0
-0.1
growth on ypd
YPD
+0.4
N.D.
-0.3
-1.6
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
N.D.
+0.7
-0.5
-1.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
+0.4
-0.3
-0.9
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
-0.0
-0.5
+0.1
auxotrophy
Dropout Complete
+0.1
N.D.
-0.4
+0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
+0.4
-1.0
+0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
+0.2
-0.5
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
N.D.
+0.9
-0.0
-0.5
auxotrophy
YNB Glucose
-0.0
N.D.
-0.3
+0.1
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
+0.3
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
N.D.
+1.0
+0.3
-0.6
growth on oleic acid
YNB Glucose
+0.3
N.D.
+0.5
-0.4
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
-0.1
+0.1
+0.2
growth on oleic acid
YNB Oleic Acid
+0.3
N.D.
-0.2
+0.5
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
N.D.
+0.4
+0.7
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
+0.3
+0.3
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
N.D.
+0.5
+0.5
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
N.D.
+1.1
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
N.D.
+1.1
+0.1
+0.1
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