Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16026 and 16027 are separated by 94 nucleotides16027 and 16028 are separated by 529 nucleotides16028 and 16029 are separated by 242 nucleotides16029 and 16030 are separated by 197 nucleotides mRNA_7658: 16026 - KOG1398 Uncharacterized conserved protein, at 783,062 to 785,466 16026 mRNA_7659: 16027 - BLAST acetylornithine transaminase [Moesziomyces antarc..., at 785,561 to 786,043 16027 mRNA_7660: 16028 - Interpro RNA polymerase II transcription mediator complex subunit 9 0, at 786,573 to 787,086 16028 mRNA_7661: 16029 - KOG3337 Protein similar to predicted member of the intramitochondrial sorting protein family, at 787,329 to 788,508 16029 mRNA_7662: 16030 - K13519 LPT1, ALE1 lysophospholipid acyltransferase, at 788,706 to 790,925 16030
Group Condition mRNA_7658 mRNA_7659 mRNA_7660 mRNA_7661 mRNA_7662
16026 16027 16028 16029 16030
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -4.0 N.D. N.D. -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -3.3 N.D. N.D. -0.9
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -1.0 N.D. N.D. -1.6
auxotrophy Dropout Complete -0.3 -0.6 N.D. N.D. -0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -1.1 N.D. N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.8 N.D. N.D. -0.5
growth on ricinoleic acid YNB Glucose +0.6 -1.2 N.D. N.D. -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 -0.2 N.D. N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.8 N.D. N.D. -0.5
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.6 N.D. N.D. -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.0 N.D. N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.7 N.D. N.D. -0.4
auxotrophy YNB Glucose +0.3 -0.5 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.0 N.D. N.D. -0.1
growth on oleic acid YNB Glucose +0.1 -0.2 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 +0.3 N.D. N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.0 N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.3 N.D. N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 N.D. N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 N.D. N.D. +0.2
growth on ypd YPD +0.3 +0.1 N.D. N.D. +1.2
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