Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16027 and 16028 are separated by 529 nucleotides16028 and 16029 are separated by 242 nucleotides16029 and 16030 are separated by 197 nucleotides16030 and 16031 are separated by 455 nucleotides mRNA_7659: 16027 - BLAST acetylornithine transaminase [Moesziomyces antarc..., at 785,561 to 786,043 16027 mRNA_7660: 16028 - Interpro RNA polymerase II transcription mediator complex subunit 9 0, at 786,573 to 787,086 16028 mRNA_7661: 16029 - KOG3337 Protein similar to predicted member of the intramitochondrial sorting protein family, at 787,329 to 788,508 16029 mRNA_7662: 16030 - K13519 LPT1, ALE1 lysophospholipid acyltransferase, at 788,706 to 790,925 16030 mRNA_7663: 16031 - K03305 TC.POT proton-dependent oligopeptide transporter, POT family, at 791,381 to 793,587 16031
Group Condition mRNA_7659 mRNA_7660 mRNA_7661 mRNA_7662 mRNA_7663
16027 16028 16029 16030 16031
growth on ricinoleic acid YNB Ricinoleic Acid -4.0 N.D. N.D. -1.0 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -3.3 N.D. N.D. -0.9 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 N.D. N.D. -1.6 +0.2
growth on ricinoleic acid YNB Glucose -1.2 N.D. N.D. -0.7 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.8 N.D. N.D. -0.5 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -1.1 N.D. N.D. -0.1 -0.6
auxotrophy Dropout Complete -0.6 N.D. N.D. -0.8 -0.5
growth on oleic acid YNB Oleic Acid -0.8 N.D. N.D. -0.5 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.6 N.D. N.D. -0.5 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.7 N.D. N.D. -0.4 -0.2
auxotrophy YNB Glucose -0.5 N.D. N.D. -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. N.D. -0.1 -0.8
growth on oleic acid YNB Glucose -0.2 N.D. N.D. -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. N.D. -0.4 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. N.D. -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. N.D. -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. N.D. +0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. N.D. +0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. N.D. +0.2 +0.4
growth on ypd YPD +0.1 N.D. N.D. +1.2 -0.0
remove
mRNA_7659
plot		 remove
mRNA_7660
plot		 remove
mRNA_7661		 remove
mRNA_7662
plot		 remove
mRNA_7663
plot