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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16034 and 16035 are separated by 143 nucleotides
16035 and 16036 are separated by 418 nucleotides
16036 and 16037 are separated by 363 nucleotides
16037 and 16038 are separated by 989 nucleotides
mRNA_7666: 16034 - K20184 VPS41 vacuolar protein sorting-associated protein 41, at 798,298 to 802,330
16034
mRNA_7667: 16035 - Hypothetical Protein, at 802,474 to 802,850
16035
mRNA_7668: 16036 - K18042 STYX serine/threonine/tyrosine-interacting protein, at 803,269 to 804,354
16036
mRNA_7669: 16037 - K06134 COQ7 ubiquinone biosynthesis monooxygenase Coq7, at 804,718 to 805,657
16037
mRNA_7670: 16038 - Hypothetical Protein, at 806,647 to 807,421
16038
Group
Condition
mRNA
_7666
mRNA
_7667
mRNA
_7668
mRNA
_7669
mRNA
_7670
16034
16035
16036
16037
16038
facs on lipid accumulation
Sorted High BODIPY Gate
-2.0
+0.4
-0.1
N.D.
-1.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.3
-0.7
-0.2
N.D.
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-2.7
-0.4
+1.9
N.D.
-0.7
ypd buoyancy
40 hrs Median Buoyancy
-0.6
-0.4
+0.6
N.D.
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.8
+0.6
+1.1
N.D.
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.6
+0.2
N.D.
-0.6
auxotrophy
YNB Glucose
+1.1
-0.5
-0.1
N.D.
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.1
+0.3
N.D.
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.2
+0.0
N.D.
-0.1
growth on ypd
YPD
+0.0
+0.5
-0.5
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.4
+0.3
N.D.
+0.1
auxotrophy
Dropout Complete
+1.7
-0.9
-0.0
N.D.
-0.9
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.1
+0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
+0.7
+0.2
N.D.
-0.8
growth on oleic acid
YNB Glucose
+0.7
-0.1
+0.3
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
+1.0
+0.4
+0.3
N.D.
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.9
+1.0
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+1.9
-0.3
+0.2
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Arginine
+1.4
-0.1
+0.5
N.D.
-0.4
growth on oleic acid
YNB Oleic Acid
+1.5
+0.4
+0.2
N.D.
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.8
+1.0
+0.1
N.D.
-0.0
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