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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16036 and 16037 are separated by 363 nucleotides
16037 and 16038 are separated by 989 nucleotides
16038 and 16039 are separated by 207 nucleotides
16039 and 16040 are separated by 127 nucleotides
mRNA_7668: 16036 - K18042 STYX serine/threonine/tyrosine-interacting protein, at 803,269 to 804,354
16036
mRNA_7669: 16037 - K06134 COQ7 ubiquinone biosynthesis monooxygenase Coq7, at 804,718 to 805,657
16037
mRNA_7670: 16038 - Hypothetical Protein, at 806,647 to 807,421
16038
mRNA_7671: 16039 - SUPERFAMILY--SSF56112, at 807,629 to 808,363
16039
mRNA_7672: 16040 - Hypothetical Protein, at 808,491 to 811,190
16040
Group
Condition
mRNA
_7668
mRNA
_7669
mRNA
_7670
mRNA
_7671
mRNA
_7672
16036
16037
16038
16039
16040
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
N.D.
-0.8
-0.9
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.1
N.D.
-0.6
-1.1
-0.3
auxotrophy
YNB Glucose
-0.1
N.D.
-0.9
+0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
-0.6
-0.4
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
-1.1
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
-0.0
-0.7
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
-0.1
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
N.D.
+0.0
-0.1
+0.0
auxotrophy
Dropout Complete
-0.0
N.D.
-0.9
+0.6
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.6
N.D.
-0.6
+0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.3
N.D.
+0.1
-0.6
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.0
N.D.
-0.3
-0.7
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
-0.5
+0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+1.9
N.D.
-0.7
-1.2
+0.1
growth on ypd
YPD
-0.5
N.D.
-0.1
+1.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
N.D.
-0.1
+0.2
+0.2
growth on oleic acid
YNB Glucose
+0.3
N.D.
-0.1
+0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
N.D.
-0.3
+0.5
-0.0
growth on ricinoleic acid
YNB Glucose
+0.3
N.D.
-0.7
+0.8
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
N.D.
-0.6
+0.8
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.5
N.D.
-0.4
+0.6
+0.2
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