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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16041 and 16042 are separated by 414 nucleotides
16042 and 16043 are separated by 561 nucleotides
16043 and 16044 are separated by 898 nucleotides
16044 and 16045 are separated by 495 nucleotides
mRNA_7673: 16041 - K14778 DDX49, DBP8 ATP-dependent RNA helicase DDX49/DBP8, at 811,508 to 813,410
16041
mRNA_7674: 16042 - SUPERFAMILY--SSF48371, at 813,825 to 816,287
16042
mRNA_7675: 16043 - Hypothetical Protein, at 816,849 to 817,556
16043
mRNA_7676: 16044 - Hypothetical Protein, at 818,455 to 819,544
16044
mRNA_7677: 16045 - Hypothetical Protein, at 820,040 to 821,034
16045
Group
Condition
mRNA
_7673
mRNA
_7674
mRNA
_7675
mRNA
_7676
mRNA
_7677
16041
16042
16043
16044
16045
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-2.2
+0.3
-1.6
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.4
-0.5
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.6
-0.6
+0.3
-0.6
ypd buoyancy
40 hrs High Buoyancy
N.D.
-2.0
+0.2
-0.2
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
-0.3
-0.2
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.0
-0.6
+0.1
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
-0.1
-0.0
-0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
+0.1
-0.3
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.6
+0.0
-0.4
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.7
+0.2
-0.1
+0.6
auxotrophy
Dropout Complete
N.D.
+0.5
-0.2
+0.2
+0.3
growth on ypd
YPD
N.D.
+1.0
+0.0
-0.0
-0.2
auxotrophy
YNB Glucose
N.D.
+0.3
+0.2
+0.1
+0.4
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.3
+0.1
+0.3
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
+0.3
+0.9
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.7
+0.1
+0.1
+0.2
growth on oleic acid
YNB Glucose
N.D.
+0.9
-0.1
+0.3
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.8
+0.3
+0.0
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.9
-0.1
+0.4
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+1.3
-0.1
+0.5
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.5
+0.3
+0.4
+0.3
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