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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16045 and 16046 are separated by 351 nucleotides
16046 and 16047 are separated by 151 nucleotides
16047 and 16048 are separated by 1004 nucleotides
16048 and 16049 are separated by 217 nucleotides
mRNA_7677: 16045 - Hypothetical Protein, at 820,040 to 821,034
16045
mRNA_7678: 16046 - K00657 speG diamine N-acetyltransferase, at 821,386 to 822,078
16046
mRNA_7679: 16047 - K12861 BCAS2 pre-mRNA-splicing factor SPF27, at 822,230 to 823,111
16047
mRNA_7680: 16048 - K11992 ACOT8, PTE acyl-CoA thioesterase 8, at 824,116 to 826,082
16048
mRNA_7681: 16049 - Hypothetical Protein, at 826,300 to 827,705
16049
Group
Condition
mRNA
_7677
mRNA
_7678
mRNA
_7679
mRNA
_7680
mRNA
_7681
16045
16046
16047
16048
16049
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-0.3
-3.3
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.6
-2.5
+0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.1
-2.0
+0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.2
-1.9
+0.2
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.5
-1.0
-0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.8
-0.7
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
+0.7
-0.7
-0.2
-0.5
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
-0.5
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.6
-0.7
+0.1
-0.1
-0.4
auxotrophy
Dropout Complete
+0.3
-0.5
+0.4
-0.0
-0.5
growth on ypd
YPD
-0.2
-0.4
-0.3
+0.2
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
+0.5
-0.5
+0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.6
-0.1
-0.2
+0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.5
-0.0
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
+0.7
-0.2
+0.0
+0.1
auxotrophy
YNB Glucose
+0.4
+0.0
+0.1
-0.2
-0.1
growth on oleic acid
YNB Glucose
+0.1
-0.1
+0.3
+0.3
-0.2
growth on oleic acid
YNB Oleic Acid
+0.2
+0.1
-0.4
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.5
+0.6
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
+0.3
+0.7
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.1
+0.6
-0.3
-0.2
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