Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16046 and 16047 are separated by 151 nucleotides16047 and 16048 are separated by 1004 nucleotides16048 and 16049 are separated by 217 nucleotides16049 and 16050 are separated by 244 nucleotides mRNA_7678: 16046 - K00657 speG diamine N-acetyltransferase, at 821,386 to 822,078 16046 mRNA_7679: 16047 - K12861 BCAS2 pre-mRNA-splicing factor SPF27, at 822,230 to 823,111 16047 mRNA_7680: 16048 - K11992 ACOT8, PTE acyl-CoA thioesterase 8, at 824,116 to 826,082 16048 mRNA_7681: 16049 - Hypothetical Protein, at 826,300 to 827,705 16049 mRNA_7682: 16050 - Hypothetical Protein, at 827,950 to 829,213 16050
Group Condition mRNA_7678 mRNA_7679 mRNA_7680 mRNA_7681 mRNA_7682
16046 16047 16048 16049 16050
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -3.3 -0.0 -0.1 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -2.0 +0.0 -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -1.0 -0.0 -0.0 -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.6 -2.5 +0.1 -0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.7 +0.3 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -1.9 +0.2 +0.0 +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.7 +0.1 -0.1 -0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.5 -0.1 -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 +0.1 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.7 -0.2 -0.5 +0.2
growth on ypd YPD -0.4 -0.3 +0.2 +0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.0 -0.1 +0.3 +0.3
auxotrophy Dropout Complete -0.5 +0.4 -0.0 -0.5 +0.6
growth on oleic acid YNB Oleic Acid +0.1 -0.4 +0.2 +0.2 +0.2
auxotrophy YNB Glucose +0.0 +0.1 -0.2 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.2 +0.0 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.6 -0.1 -0.1 +0.5
growth on oleic acid YNB Glucose -0.1 +0.3 +0.3 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.5 +0.1 +0.4 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.6 -0.3 -0.2 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.7 -0.1 +0.1 -0.0
remove
mRNA_7678
plot
remove
mRNA_7679
plot
remove
mRNA_7680
remove
mRNA_7681
plot
remove
mRNA_7682
plot