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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16051 and 16052 are separated by 191 nucleotides
16052 and 16053 are separated by 742 nucleotides
16053 and 16054 are separated by 817 nucleotides
16054 and 16055 are separated by 153 nucleotides
mRNA_7683: 16051 - K02542 MCM6 DNA replication licensing factor MCM6, at 829,479 to 832,868
16051
mRNA_7684: 16052 - Hypothetical Protein, at 833,060 to 834,277
16052
mRNA_7685: 16053 - Hypothetical Protein, at 835,020 to 835,589
16053
mRNA_7686: 16054 - K06185 ABCF2 ATP-binding cassette, subfamily F, member 2, at 836,407 to 838,350
16054
mRNA_7687: 16055 - SUPERFAMILY--SSF48371, at 838,504 to 840,672
16055
Group
Condition
mRNA
_7683
mRNA
_7684
mRNA
_7685
mRNA
_7686
mRNA
_7687
16051
16052
16053
16054
16055
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.7
-0.3
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.3
-0.2
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.3
-0.1
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.1
N.D.
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.1
N.D.
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
-0.1
N.D.
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
-0.2
N.D.
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.2
+0.2
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
+0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.0
N.D.
-0.0
auxotrophy
Dropout Complete
N.D.
-0.0
+0.1
N.D.
+0.1
auxotrophy
YNB Glucose
N.D.
-0.2
+0.1
N.D.
+0.2
growth on ypd
YPD
N.D.
-0.2
+0.3
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.3
N.D.
-0.0
growth on ricinoleic acid
YNB Glucose
N.D.
+0.2
+0.2
N.D.
-0.0
growth on oleic acid
YNB Glucose
N.D.
+0.3
+0.2
N.D.
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.2
+0.4
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.3
+0.1
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.4
+0.1
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.3
+0.1
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
+0.5
N.D.
+0.2
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