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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16053 and 16054 are separated by 817 nucleotides
16054 and 16055 are separated by 153 nucleotides
16055 and 16056 are separated by 103 nucleotides
16056 and 16057 are separated by 209 nucleotides
mRNA_7685: 16053 - Hypothetical Protein, at 835,020 to 835,589
16053
mRNA_7686: 16054 - K06185 ABCF2 ATP-binding cassette, subfamily F, member 2, at 836,407 to 838,350
16054
mRNA_7687: 16055 - SUPERFAMILY--SSF48371, at 838,504 to 840,672
16055
mRNA_7688: 16056 - Hypothetical Protein, at 840,776 to 844,586
16056
mRNA_7689: 16057 - BLAST triacylglycerol lipase [Pochonia chlamydosporia 170], at 844,796 to 845,727
16057
Group
Condition
mRNA
_7685
mRNA
_7686
mRNA
_7687
mRNA
_7688
mRNA
_7689
16053
16054
16055
16056
16057
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
-0.2
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
-0.3
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
-0.2
-0.1
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
N.D.
-0.2
+0.0
+0.2
growth on ypd
YPD
+0.3
N.D.
+0.1
-0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
N.D.
+0.0
+0.1
-0.2
auxotrophy
Dropout Complete
+0.1
N.D.
+0.1
-0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
N.D.
-0.1
+0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
-0.1
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
N.D.
-0.0
+0.0
+0.2
growth on ricinoleic acid
YNB Glucose
+0.2
N.D.
-0.0
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
N.D.
-0.1
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
-0.0
-0.2
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
-0.0
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
+0.1
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.5
N.D.
+0.2
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.0
+0.3
+0.5
growth on oleic acid
YNB Glucose
+0.2
N.D.
-0.0
-0.1
+0.5
auxotrophy
YNB Glucose
+0.1
N.D.
+0.2
-0.2
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
+0.1
+0.3
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
N.D.
-0.2
+0.0
+0.8
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