Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16055 and 16056 are separated by 103 nucleotides16056 and 16057 are separated by 209 nucleotides16057 and 16058 are separated by 519 nucleotides16058 and 16059 are separated by 439 nucleotides mRNA_7687: 16055 - SUPERFAMILY--SSF48371, at 838,504 to 840,672 16055 mRNA_7688: 16056 - Hypothetical Protein, at 840,776 to 844,586 16056 mRNA_7689: 16057 - BLAST triacylglycerol lipase [Pochonia chlamydosporia 170], at 844,796 to 845,727 16057 mRNA_7690: 16058 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 846,247 to 848,747 16058 mRNA_7691: 16059 - K10770 ALKBH8 alkylated DNA repair protein alkB homolog 8, at 849,187 to 849,939 16059
Group Condition mRNA_7687 mRNA_7688 mRNA_7689 mRNA_7690 mRNA_7691
16055 16056 16057 16058 16059
growth on ypd YPD +0.1 -0.2 -0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.2 +0.2 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 +0.2 -0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 -0.2 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 +0.2 -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.1 +0.1 -0.4 +0.2
auxotrophy Dropout Complete +0.1 -0.3 +0.2 -0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 -0.0 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 -0.1 -0.3 +0.0
growth on ricinoleic acid YNB Glucose -0.0 -0.2 +0.2 -0.1 +0.1
auxotrophy YNB Glucose +0.2 -0.2 +0.5 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.0 +0.2 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 +0.1 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.3 +0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 +0.3 +0.1 +0.2
growth on oleic acid YNB Oleic Acid -0.0 -0.0 +0.2 -0.2 +0.2
growth on oleic acid YNB Glucose -0.0 -0.1 +0.5 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.1 -0.2 +0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.3 +0.5 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.3 +0.3 -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.0 +0.8 +0.0 +0.4
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