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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16055 and 16056 are separated by 103 nucleotides
16056 and 16057 are separated by 209 nucleotides
16057 and 16058 are separated by 519 nucleotides
16058 and 16059 are separated by 439 nucleotides
mRNA_7687: 16055 - SUPERFAMILY--SSF48371, at 838,504 to 840,672
16055
mRNA_7688: 16056 - Hypothetical Protein, at 840,776 to 844,586
16056
mRNA_7689: 16057 - BLAST triacylglycerol lipase [Pochonia chlamydosporia 170], at 844,796 to 845,727
16057
mRNA_7690: 16058 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 846,247 to 848,747
16058
mRNA_7691: 16059 - K10770 ALKBH8 alkylated DNA repair protein alkB homolog 8, at 849,187 to 849,939
16059
Group
Condition
mRNA
_7687
mRNA
_7688
mRNA
_7689
mRNA
_7690
mRNA
_7691
16055
16056
16057
16058
16059
growth on ypd
YPD
+0.1
-0.2
-0.3
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.2
+0.2
-0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
+0.2
-0.1
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.2
-0.2
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.1
+0.2
-0.3
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
+0.1
-0.4
+0.2
auxotrophy
Dropout Complete
+0.1
-0.3
+0.2
-0.3
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.2
-0.0
-0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.1
-0.1
-0.3
+0.0
growth on ricinoleic acid
YNB Glucose
-0.0
-0.2
+0.2
-0.1
+0.1
auxotrophy
YNB Glucose
+0.2
-0.2
+0.5
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.0
+0.2
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.0
+0.1
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.3
+0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
+0.3
+0.1
+0.2
growth on oleic acid
YNB Oleic Acid
-0.0
-0.0
+0.2
-0.2
+0.2
growth on oleic acid
YNB Glucose
-0.0
-0.1
+0.5
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.1
-0.2
+0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.3
+0.5
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.3
+0.3
-0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.0
+0.8
+0.0
+0.4
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