Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16059 and 16060 are separated by 614 nucleotides16060 and 16061 are separated by 128 nucleotides16061 and 16062 are separated by 397 nucleotides16062 and 16063 are separated by 658 nucleotides mRNA_7691: 16059 - K10770 ALKBH8 alkylated DNA repair protein alkB homolog 8, at 849,187 to 849,939 16059 mRNA_7692: 16060 - HMMPfam-Cell division control protein 14, SIN component-PF08045, at 850,554 to 851,989 16060 mRNA_7693: 16061 - SUPERFAMILY--SSF57701, at 852,118 to 853,465 16061 mRNA_7694: 16062 - K12581 CNOT7_8, CAF1, POP2 CCR4-NOT transcription complex subunit 7/8, at 853,863 to 855,272 16062 mRNA_7695: 16063 - HMMPfam-Domain of unknown function (DUF1992)-PF09350, at 855,931 to 857,738 16063
Group Condition mRNA_7691 mRNA_7692 mRNA_7693 mRNA_7694 mRNA_7695
16059 16060 16061 16062 16063
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 -0.5 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.2 -0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.1 -0.5 N.D. +0.0
auxotrophy YNB Glucose -0.4 +0.1 -0.5 N.D. +0.1
auxotrophy Dropout Complete -0.0 -0.3 -0.4 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 -0.2 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 -0.4 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 +0.0 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 -0.6 N.D. +0.3
growth on oleic acid YNB Glucose -0.0 +0.2 -0.5 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.1 -0.5 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.3 -0.3 N.D. -0.2
growth on oleic acid YNB Oleic Acid +0.2 -0.0 -0.6 N.D. +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.0 -0.5 N.D. +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 -0.3 N.D. +0.2
growth on ypd YPD -0.2 +0.4 +0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.0 +0.0 N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.1 -0.0 N.D. +0.5
growth on ricinoleic acid YNB Glucose +0.1 +0.3 +0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 +0.3 N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.3 +0.3 N.D. +0.5
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