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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16060 and 16061 are separated by 128 nucleotides
16061 and 16062 are separated by 397 nucleotides
16062 and 16063 are separated by 658 nucleotides
16063 and 16064 are separated by 1205 nucleotides
mRNA_7692: 16060 - HMMPfam-Cell division control protein 14, SIN component-PF08045, at 850,554 to 851,989
16060
mRNA_7693: 16061 - SUPERFAMILY--SSF57701, at 852,118 to 853,465
16061
mRNA_7694: 16062 - K12581 CNOT7_8, CAF1, POP2 CCR4-NOT transcription complex subunit 7/8, at 853,863 to 855,272
16062
mRNA_7695: 16063 - HMMPfam-Domain of unknown function (DUF1992)-PF09350, at 855,931 to 857,738
16063
mRNA_7696: 16064 - K11269 CTF18, CHL12 chromosome transmission fidelity protein 18, at 858,944 to 862,198
16064
Group
Condition
mRNA
_7692
mRNA
_7693
mRNA
_7694
mRNA
_7695
mRNA
_7696
16060
16061
16062
16063
16064
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.5
N.D.
+0.1
-0.6
auxotrophy
Dropout Complete
-0.3
-0.4
N.D.
+0.2
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.5
N.D.
-0.0
-0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.5
N.D.
+0.0
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.6
N.D.
+0.3
-0.3
auxotrophy
YNB Glucose
+0.1
-0.5
N.D.
+0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.3
N.D.
+0.2
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.4
N.D.
+0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.3
N.D.
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.0
N.D.
-0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.0
-0.6
N.D.
+0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.2
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.2
N.D.
-0.2
+0.1
growth on oleic acid
YNB Glucose
+0.2
-0.5
N.D.
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.0
N.D.
+0.5
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.0
N.D.
+0.5
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.5
N.D.
+0.5
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.3
N.D.
+0.4
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.3
N.D.
+0.5
-0.6
growth on ypd
YPD
+0.4
+0.1
N.D.
+0.3
-0.3
growth on ricinoleic acid
YNB Glucose
+0.3
+0.3
N.D.
+0.2
-0.0
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