Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16065 and 16066 are separated by 409 nucleotides
16066 and 16067 are separated by 190 nucleotides
16067 and 16068 are separated by 3731 nucleotides
16068 and 16069 are separated by 602 nucleotides
mRNA_7697: 16065 - K00815 TAT tyrosine aminotransferase, at 862,467 to 863,875
16065
mRNA_7698: 16066 - Hypothetical Protein, at 864,285 to 865,332
16066
mRNA_7699: 16067 - K11681 SWR1 helicase SWR1, at 865,523 to 871,227
16067
mRNA_7700: 16068 - HMMPfam-14-3-3 protein-PF00244,PRINTS-14-3-3 protein zeta signature-PR00305,ProSitePatterns-14-3-3 proteins signature 1.-PS00796,SMART-14-3-3 homologues-SM00101,SUPERFAMILY--SSF48445, at 874,959 to 876,595
16068
mRNA_7701: 16069 - SMART-Armadillo/beta-catenin-like repeats-SM00185,SUPERFAMILY--SSF48371, at 877,198 to 880,311
16069
Group
Condition
mRNA
_7697
mRNA
_7698
mRNA
_7699
mRNA
_7700
mRNA
_7701
16065
16066
16067
16068
16069
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.9
N.D.
+0.4
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.1
N.D.
-0.6
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
N.D.
-0.5
+0.1
auxotrophy
Dropout Complete
-0.0
-0.4
N.D.
+0.1
+0.1
growth on ricinoleic acid
YNB Glucose
-0.3
-0.2
N.D.
+0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
N.D.
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.1
N.D.
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.6
N.D.
+0.2
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.3
N.D.
-0.1
-0.2
auxotrophy
YNB Glucose
-0.0
-0.3
N.D.
+0.3
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.2
N.D.
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.1
N.D.
-0.1
+0.1
growth on ypd
YPD
+0.1
+0.3
N.D.
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.3
N.D.
+0.4
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
N.D.
-0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.3
N.D.
+0.6
-0.4
growth on oleic acid
YNB Glucose
-0.2
+0.2
N.D.
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.1
N.D.
+0.4
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.2
N.D.
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
-0.0
+0.0
N.D.
+0.5
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
+0.1
N.D.
-0.1
+0.5
remove
mRNA_7697
plot
remove
mRNA_7698
plot
remove
mRNA_7699
remove
mRNA_7700
plot
remove
mRNA_7701
plot