Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16065 and 16066 are separated by 409 nucleotides16066 and 16067 are separated by 190 nucleotides16067 and 16068 are separated by 3731 nucleotides16068 and 16069 are separated by 602 nucleotides mRNA_7697: 16065 - K00815 TAT tyrosine aminotransferase, at 862,467 to 863,875 16065 mRNA_7698: 16066 - Hypothetical Protein, at 864,285 to 865,332 16066 mRNA_7699: 16067 - K11681 SWR1 helicase SWR1, at 865,523 to 871,227 16067 mRNA_7700: 16068 - HMMPfam-14-3-3 protein-PF00244,PRINTS-14-3-3 protein zeta signature-PR00305,ProSitePatterns-14-3-3 proteins signature 1.-PS00796,SMART-14-3-3 homologues-SM00101,SUPERFAMILY--SSF48445, at 874,959 to 876,595 16068 mRNA_7701: 16069 - SMART-Armadillo/beta-catenin-like repeats-SM00185,SUPERFAMILY--SSF48371, at 877,198 to 880,311 16069
Group Condition mRNA_7697 mRNA_7698 mRNA_7699 mRNA_7700 mRNA_7701
16065 16066 16067 16068 16069
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.9 N.D. +0.4 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 N.D. -0.6 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 N.D. -0.5 +0.1
auxotrophy Dropout Complete -0.0 -0.4 N.D. +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.2 N.D. +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.3 N.D. -0.0 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 N.D. +0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.6 N.D. +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.3 N.D. -0.1 -0.2
auxotrophy YNB Glucose -0.0 -0.3 N.D. +0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.2 N.D. +0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 N.D. -0.1 +0.1
growth on ypd YPD +0.1 +0.3 N.D. -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 N.D. +0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 N.D. -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.3 N.D. +0.6 -0.4
growth on oleic acid YNB Glucose -0.2 +0.2 N.D. +0.4 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 N.D. +0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.0 +0.0 N.D. +0.5 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.1 N.D. -0.1 +0.5
remove
mRNA_7697
plot
remove
mRNA_7698
plot
remove
mRNA_7699
remove
mRNA_7700
plot
remove
mRNA_7701
plot