Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16067 and 16068 are separated by 3731 nucleotides16068 and 16069 are separated by 602 nucleotides16069 and 16070 are separated by 446 nucleotides16070 and 16071 are separated by 335 nucleotides mRNA_7699: 16067 - K11681 SWR1 helicase SWR1, at 865,523 to 871,227 16067 mRNA_7700: 16068 - HMMPfam-14-3-3 protein-PF00244,PRINTS-14-3-3 protein zeta signature-PR00305,ProSitePatterns-14-3-3 proteins signature 1.-PS00796,SMART-14-3-3 homologues-SM00101,SUPERFAMILY--SSF48445, at 874,959 to 876,595 16068 mRNA_7701: 16069 - SMART-Armadillo/beta-catenin-like repeats-SM00185,SUPERFAMILY--SSF48371, at 877,198 to 880,311 16069 mRNA_7702: 16070 - BLAST endoglucanase [Aspergillus fumigatus Af293], at 880,758 to 882,745 16070 mRNA_7703: 16071 - KOG2996 Rho guanine nucleotide exchange factor VAV3, at 883,081 to 887,724 16071
Group Condition mRNA_7699 mRNA_7700 mRNA_7701 mRNA_7702 mRNA_7703
16067 16068 16069 16070 16071
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 -0.2 -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.2 +0.0 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.2 +0.1 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.5 +0.1 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 +0.1 -0.2 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.1 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.6 -0.4 -0.5 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +0.2 -0.4 -0.2
auxotrophy YNB Glucose N.D. +0.3 +0.0 -0.3 -0.2
auxotrophy Dropout Complete N.D. +0.1 +0.1 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.3 -0.1 -0.1 -0.2
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 +0.2 -0.2 -0.2
growth on ypd YPD N.D. -0.2 -0.0 +0.5 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.1 -0.1 +0.2
growth on oleic acid YNB Glucose N.D. +0.4 +0.0 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 +0.5 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 -0.0 +0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.2 +0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. +0.5 +0.1 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.3 +0.2 +0.3
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