Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16069 and 16070 are separated by 446 nucleotides16070 and 16071 are separated by 335 nucleotides16071 and 16072 are separated by 286 nucleotides16072 and 16073 are separated by 181 nucleotides mRNA_7701: 16069 - SMART-Armadillo/beta-catenin-like repeats-SM00185,SUPERFAMILY--SSF48371, at 877,198 to 880,311 16069 mRNA_7702: 16070 - BLAST endoglucanase [Aspergillus fumigatus Af293], at 880,758 to 882,745 16070 mRNA_7703: 16071 - KOG2996 Rho guanine nucleotide exchange factor VAV3, at 883,081 to 887,724 16071 mRNA_7704: 16072 - K02214 CDC7 cell division control protein 7, at 888,011 to 890,440 16072 mRNA_7705: 16073 - Hypothetical Protein, at 890,622 to 891,361 16073
Group Condition mRNA_7701 mRNA_7702 mRNA_7703 mRNA_7704 mRNA_7705
16069 16070 16071 16072 16073
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 -0.2 N.D. -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 -0.7 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.5 +0.0 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.2 +0.2 N.D. -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.0 -0.4 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 +0.2 N.D. -0.1
auxotrophy YNB Glucose +0.0 -0.3 -0.2 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.2 -0.7 N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 -0.2 N.D. +0.1
auxotrophy Dropout Complete +0.1 -0.2 -0.0 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 -0.0 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.4 -0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 -0.2 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 +0.2 N.D. -0.2
growth on oleic acid YNB Glucose +0.0 -0.0 -0.1 N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.1 -0.2 -0.1 N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 -0.2 N.D. +0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.1 -0.2 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 +0.2 N.D. -0.2
growth on ypd YPD -0.0 +0.5 +0.1 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.2 +0.3 N.D. +0.1
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