Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16076 and 16077 are separated by 689 nucleotides16077 and 16078 are separated by 174 nucleotides16078 and 16079 are separated by 88 nucleotides16079 and 16080 are separated by 99 nucleotides mRNA_7708: 16076 - Hypothetical Protein, at 900,056 to 901,517 16076 mRNA_7709: 16077 - K19877 CHS5 chitin biosynthesis protein CHS5, at 902,207 to 904,253 16077 mRNA_7710: 16078 - K06067 HDAC1_2 histone deacetylase 1/2, at 904,428 to 906,811 16078 mRNA_7711: 16079 - Hypothetical Protein, at 906,900 to 908,235 16079 mRNA_7712: 16080 - K12586 RRP43, EXOSC8, OIP2 exosome complex component RRP43, at 908,335 to 909,649 16080
Group Condition mRNA_7708 mRNA_7709 mRNA_7710 mRNA_7711 mRNA_7712
16076 16077 16078 16079 16080
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.4 N.D. -0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.2 N.D. -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 N.D. +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.3 N.D. +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.4 N.D. +0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.2 N.D. -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.2 N.D. -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 N.D. +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.1 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.2 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 N.D. +0.2 N.D.
auxotrophy YNB Glucose +0.3 -0.3 N.D. +0.5 N.D.
growth on ricinoleic acid YNB Glucose +0.3 -0.2 N.D. +0.4 N.D.
growth on ypd YPD +0.1 +0.0 N.D. +0.4 N.D.
growth on oleic acid YNB Glucose +0.3 +0.1 N.D. +0.2 N.D.
auxotrophy Dropout Complete +0.1 -0.0 N.D. +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.1 N.D. +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.3 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.7 N.D. -0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.6 N.D. +0.2 N.D.
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