Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16078 and 16079 are separated by 88 nucleotides16079 and 16080 are separated by 99 nucleotides16080 and 16081 are separated by 112 nucleotides16081 and 16082 are separated by 464 nucleotides mRNA_7710: 16078 - K06067 HDAC1_2 histone deacetylase 1/2, at 904,428 to 906,811 16078 mRNA_7711: 16079 - Hypothetical Protein, at 906,900 to 908,235 16079 mRNA_7712: 16080 - K12586 RRP43, EXOSC8, OIP2 exosome complex component RRP43, at 908,335 to 909,649 16080 mRNA_7713: 16081 - Hypothetical Protein, at 909,762 to 910,518 16081 mRNA_7714: 16082 - Hypothetical Protein, at 910,983 to 911,507 16082
Group Condition mRNA_7710 mRNA_7711 mRNA_7712 mRNA_7713 mRNA_7714
16078 16079 16080 16081 16082
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 N.D. N.D. -1.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 N.D. N.D. -0.8
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 N.D. N.D. -0.7
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 N.D. N.D. -0.8
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 N.D. N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.5 N.D. N.D. +0.2
growth on oleic acid YNB Glucose N.D. +0.2 N.D. N.D. -0.4
growth on ricinoleic acid YNB Glucose N.D. +0.4 N.D. N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.0 N.D. N.D. +0.1
auxotrophy Dropout Complete N.D. +0.5 N.D. N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 N.D. N.D. +0.4
growth on oleic acid YNB Oleic Acid N.D. +0.2 N.D. N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 N.D. N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 N.D. N.D. +0.2
growth on ypd YPD N.D. +0.4 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 N.D. N.D. +0.6
auxotrophy YNB Glucose N.D. +0.5 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 N.D. N.D. +1.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 N.D. N.D. +1.9
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