Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16079 and 16080 are separated by 99 nucleotides16080 and 16081 are separated by 112 nucleotides16081 and 16082 are separated by 464 nucleotides16082 and 16083 are separated by 700 nucleotides mRNA_7711: 16079 - Hypothetical Protein, at 906,900 to 908,235 16079 mRNA_7712: 16080 - K12586 RRP43, EXOSC8, OIP2 exosome complex component RRP43, at 908,335 to 909,649 16080 mRNA_7713: 16081 - Hypothetical Protein, at 909,762 to 910,518 16081 mRNA_7714: 16082 - Hypothetical Protein, at 910,983 to 911,507 16082 mRNA_7715: 16083 - K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase, at 912,208 to 914,199 16083
Group Condition mRNA_7711 mRNA_7712 mRNA_7713 mRNA_7714 mRNA_7715
16079 16080 16081 16082 16083
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. N.D. -1.4 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. N.D. -0.8 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. N.D. -0.8 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.5 N.D. N.D. +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. N.D. -0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. N.D. -0.7 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. N.D. -0.2 -0.0
growth on oleic acid YNB Glucose +0.2 N.D. N.D. -0.4 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. -0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.4 N.D. N.D. -0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. N.D. +0.1 +0.1
growth on ypd YPD +0.4 N.D. N.D. +0.3 -0.3
growth on oleic acid YNB Oleic Acid +0.2 N.D. N.D. +0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. N.D. +0.4 +0.3
auxotrophy Dropout Complete +0.5 N.D. N.D. -0.2 +0.6
auxotrophy YNB Glucose 75mM Arginine +0.5 N.D. N.D. +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. N.D. +0.6 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. N.D. +0.3 +0.6
auxotrophy YNB Glucose +0.5 N.D. N.D. +0.4 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. N.D. +1.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. N.D. +1.9 +0.4
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