Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16080 and 16081 are separated by 112 nucleotides16081 and 16082 are separated by 464 nucleotides16082 and 16083 are separated by 700 nucleotides16083 and 16084 are separated by 177 nucleotides mRNA_7712: 16080 - K12586 RRP43, EXOSC8, OIP2 exosome complex component RRP43, at 908,335 to 909,649 16080 mRNA_7713: 16081 - Hypothetical Protein, at 909,762 to 910,518 16081 mRNA_7714: 16082 - Hypothetical Protein, at 910,983 to 911,507 16082 mRNA_7715: 16083 - K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase, at 912,208 to 914,199 16083 mRNA_7716: 16084 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 914,377 to 916,926 16084
Group Condition mRNA_7712 mRNA_7713 mRNA_7714 mRNA_7715 mRNA_7716
16080 16081 16082 16083 16084
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.8 +0.0 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.8 +0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -1.4 +0.3 +0.0
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.4 +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.3 -0.0 -0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.4 -0.0 -0.0
growth on ypd YPD N.D. N.D. +0.3 -0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.2 +0.3 -0.8
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.1 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.7 +0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.2 -0.0 -0.0
auxotrophy Dropout Complete N.D. N.D. -0.2 +0.6 -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.2 -0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.4 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.1 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.3 +0.6 -0.4
auxotrophy YNB Glucose N.D. N.D. +0.4 +0.6 -0.5
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.4 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.6 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +1.4 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +1.9 +0.4 +0.1
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