Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16083 and 16084 are separated by 177 nucleotides16084 and 16085 are separated by 47 nucleotides16085 and 16086 are separated by 561 nucleotides16086 and 16087 are separated by 319 nucleotides mRNA_7715: 16083 - K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase, at 912,208 to 914,199 16083 mRNA_7716: 16084 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 914,377 to 916,926 16084 mRNA_7717: 16085 - K17979 MDM31 mitochondrial distribution and morphology protein 31, at 916,974 to 919,453 16085 mRNA_7718: 16086 - K08516 YKT6 synaptobrevin homolog YKT6, at 920,015 to 921,107 16086 mRNA_7719: 16087 - Hypothetical Protein, at 921,427 to 923,879 16087
Group Condition mRNA_7715 mRNA_7716 mRNA_7717 mRNA_7718 mRNA_7719
16083 16084 16085 16086 16087
growth on ypd YPD -0.3 -0.4 N.D. N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.6 N.D. N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.5 N.D. N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 N.D. N.D. -0.3
growth on ricinoleic acid YNB Glucose +0.1 -0.3 N.D. N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.8 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 N.D. N.D. -0.2
growth on oleic acid YNB Oleic Acid +0.1 -0.1 N.D. N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 N.D. N.D. +0.1
auxotrophy Dropout Complete +0.6 -0.5 N.D. N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 N.D. N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.0 N.D. N.D. -0.1
growth on oleic acid YNB Glucose -0.0 -0.0 N.D. N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.0 N.D. N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine +0.6 -0.4 N.D. N.D. +0.2
auxotrophy YNB Glucose +0.6 -0.5 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.1 N.D. N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.1 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.3 N.D. N.D. +0.2
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