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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16090 and 16091 are separated by 393 nucleotides
16091 and 16092 are separated by 246 nucleotides
16092 and 16093 are separated by 408 nucleotides
16093 and 16094 are separated by 984 nucleotides
mRNA_7722: 16090 - BLAST iQ calmodulin-binding motif protein [Moesziomyces..., at 928,905 to 930,722
16090
mRNA_7723: 16091 - HMMPfam-Domain of unknown function (DUF427)-PF04248, at 931,116 to 931,814
16091
mRNA_7724: 16092 - KOG2644 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes, at 932,061 to 933,452
16092
mRNA_7725: 16093 - Hypothetical Protein, at 933,861 to 936,370
16093
mRNA_7726: 16094 - KOG1231 Proteins containing the FAD binding domain, at 937,355 to 939,752
16094
Group
Condition
mRNA
_7722
mRNA
_7723
mRNA
_7724
mRNA
_7725
mRNA
_7726
16090
16091
16092
16093
16094
auxotrophy
Dropout Complete
+0.0
-0.4
+0.2
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.5
-0.1
-0.3
+0.1
growth on ypd
YPD
+0.1
-0.3
-0.5
-0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.6
+0.1
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.3
+0.0
-0.3
-0.3
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
-0.2
-0.3
-0.1
auxotrophy
YNB Glucose
+0.0
-0.1
+0.2
-0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.6
+0.3
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.4
+0.1
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.5
-0.3
-0.3
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.3
-0.1
-0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.4
+0.4
+0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.1
+0.2
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.8
+0.1
-0.5
+0.1
growth on oleic acid
YNB Glucose
+0.1
-0.0
+0.3
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.3
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.4
+0.5
-0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.1
+0.7
-0.4
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.4
+0.0
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
-0.0
+0.1
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.8
+0.5
-0.0
-0.0
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mRNA_7724
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