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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16091 and 16092 are separated by 246 nucleotides
16092 and 16093 are separated by 408 nucleotides
16093 and 16094 are separated by 984 nucleotides
16094 and 16095 are separated by 374 nucleotides
mRNA_7723: 16091 - HMMPfam-Domain of unknown function (DUF427)-PF04248, at 931,116 to 931,814
16091
mRNA_7724: 16092 - KOG2644 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes, at 932,061 to 933,452
16092
mRNA_7725: 16093 - Hypothetical Protein, at 933,861 to 936,370
16093
mRNA_7726: 16094 - KOG1231 Proteins containing the FAD binding domain, at 937,355 to 939,752
16094
mRNA_7727: 16095 - K13354 SLC25A17, PMP34 solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17, at 940,127 to 941,686
16095
Group
Condition
mRNA
_7723
mRNA
_7724
mRNA
_7725
mRNA
_7726
mRNA
_7727
16091
16092
16093
16094
16095
growth on ypd
YPD
-0.3
-0.5
-0.0
+0.2
-0.4
growth on oleic acid
YNB Oleic Acid
+0.1
-0.2
-0.3
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.0
-0.3
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.1
+0.0
+0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
+0.3
-0.1
+0.1
-0.3
auxotrophy
Dropout Complete
-0.4
+0.2
-0.3
-0.2
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.1
-0.3
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
-0.3
-0.3
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.6
+0.1
+0.1
-0.1
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.1
-0.2
+0.1
-0.1
auxotrophy
YNB Glucose
-0.1
+0.2
-0.2
-0.2
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.4
+0.4
+0.2
-0.1
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.2
-0.1
+0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
+0.1
-0.5
+0.1
+0.0
growth on oleic acid
YNB Glucose
-0.0
+0.3
-0.2
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.0
+0.0
+0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.7
-0.4
+0.2
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.3
+0.1
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.0
+0.1
+0.5
-0.0
growth on ricinoleic acid
YNB Glucose
+0.4
+0.5
-0.3
+0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.8
+0.5
-0.0
-0.0
-0.1
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mRNA_7724
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mRNA_7725
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