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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16096 and 16097 are separated by 867 nucleotides
16097 and 16098 are separated by 692 nucleotides
16098 and 16099 are separated by 1005 nucleotides
16099 and 16100 are separated by 812 nucleotides
mRNA_7728: 16096 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 942,668 to 943,581
16096
mRNA_7729: 16097 - KOG0537 Cytochrome b5, at 944,449 to 944,897
16097
mRNA_7730: 16098 - Hypothetical Protein, at 945,590 to 946,257
16098
mRNA_7731: 16099 - Hypothetical Protein, at 947,263 to 948,324
16099
mRNA_7732: 16100 - Hypothetical Protein, at 949,137 to 950,100
16100
Group
Condition
mRNA
_7728
mRNA
_7729
mRNA
_7730
mRNA
_7731
mRNA
_7732
16096
16097
16098
16099
16100
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-1.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.1
N.D.
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.3
N.D.
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.1
N.D.
+0.1
auxotrophy
YNB Glucose
N.D.
N.D.
-0.1
N.D.
+0.3
growth on ypd
YPD
N.D.
N.D.
-0.3
N.D.
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.2
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
-0.2
N.D.
+0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.2
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
-0.1
N.D.
+0.6
auxotrophy
Dropout Complete
N.D.
N.D.
+0.3
N.D.
+0.3
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.2
N.D.
+0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.2
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.7
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.5
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.2
N.D.
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.5
N.D.
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.3
N.D.
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.2
N.D.
+0.8
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.8
N.D.
+0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+1.0
N.D.
+0.9
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