Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16101 and 16102 are separated by 929 nucleotides
16102 and 16103 are separated by 215 nucleotides
16103 and 16104 are separated by 1353 nucleotides
16104 and 16105 are separated by 583 nucleotides
mRNA_7733: 16101 - HMMPfam-DinB superfamily-PF12867, at 950,783 to 951,558
16101
mRNA_7734: 16102 - Hypothetical Protein, at 952,488 to 953,987
16102
mRNA_7735: 16103 - Hypothetical Protein, at 954,203 to 954,907
16103
mRNA_7736: 16104 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 956,261 to 958,930
16104
mRNA_7737: 16105 - HMMPfam-Antibiotic biosynthesis monooxygenase-PF03992,SUPERFAMILY--SSF54909, at 959,514 to 960,315
16105
Group
Condition
mRNA
_7733
mRNA
_7734
mRNA
_7735
mRNA
_7736
mRNA
_7737
16101
16102
16103
16104
16105
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.0
+0.1
N.D.
-1.9
auxotrophy
YNB Glucose 75mM Methionine
-0.7
+0.0
-0.6
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.0
-1.0
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-1.7
-0.2
-0.2
N.D.
+0.6
growth on ypd
YPD
-0.3
-0.2
+0.0
N.D.
-0.9
auxotrophy
YNB Glucose
-0.2
+0.1
-0.5
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.3
-0.0
N.D.
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.5
-0.1
N.D.
+0.0
auxotrophy
Dropout Complete
-0.6
+0.2
-0.1
N.D.
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-0.2
-0.2
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
+0.0
N.D.
+0.7
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.1
N.D.
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.2
+0.1
N.D.
+0.9
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.1
+0.0
N.D.
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.0
-0.1
N.D.
+1.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.1
+0.3
N.D.
+0.6
ypd buoyancy
40 hrs High Buoyancy
+0.7
-0.2
+0.2
N.D.
+0.6
growth on ricinoleic acid
YNB Glucose
+0.5
+0.3
-0.4
N.D.
+1.1
growth on oleic acid
YNB Glucose
+0.1
+0.3
+0.5
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
-0.2
+0.5
N.D.
+1.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
-0.2
+0.4
N.D.
+1.1
remove
mRNA_7733
plot
remove
mRNA_7734
plot
remove
mRNA_7735
remove
mRNA_7736
plot
remove
mRNA_7737
plot