Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16104 and 16105 are separated by 583 nucleotides16105 and 16106 are separated by 148 nucleotides16106 and 16107 are separated by 276 nucleotides16107 and 16108 are separated by 232 nucleotides mRNA_7736: 16104 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 956,261 to 958,930 16104 mRNA_7737: 16105 - HMMPfam-Antibiotic biosynthesis monooxygenase-PF03992,SUPERFAMILY--SSF54909, at 959,514 to 960,315 16105 mRNA_7738: 16106 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 960,464 to 961,733 16106 mRNA_7739: 16107 - K20476 RIC1 RAB6A-GEF complex partner protein 1, at 962,010 to 966,625 16107 mRNA_7740: 16108 - HMMPfam-Kinetochore complex Sim4 subunit Fta1-PF13092, at 966,858 to 968,054 16108
Group Condition mRNA_7736 mRNA_7737 mRNA_7738 mRNA_7739 mRNA_7740
16104 16105 16106 16107 16108
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.9 +0.2 -0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 +0.5 -2.6 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 +0.7 -2.0 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 +0.1 -0.7 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.6 +0.1 -1.7 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.5 -0.3 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.6 -0.1 -1.1 +0.2
growth on ypd YPD N.D. -0.9 +0.7 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 +0.1 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +1.1 -0.2 -1.6 +0.3
auxotrophy YNB Glucose N.D. -0.3 +0.4 -0.5 +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.5 -0.5 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.2 +0.6 -1.0 -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.6 -0.1 -0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.9 +0.4 -0.6 -0.3
auxotrophy Dropout Complete N.D. +0.3 +0.2 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +1.1 -0.1 -0.4 +0.0
growth on oleic acid YNB Glucose N.D. +0.5 +0.2 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.7 +0.6 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.7 +0.4 +0.5 -0.3
growth on ricinoleic acid YNB Glucose N.D. +1.1 +0.8 -0.1 -0.0
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