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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16105 and 16106 are separated by 148 nucleotides
16106 and 16107 are separated by 276 nucleotides
16107 and 16108 are separated by 232 nucleotides
16108 and 16109 are separated by 312 nucleotides
mRNA_7737: 16105 - HMMPfam-Antibiotic biosynthesis monooxygenase-PF03992,SUPERFAMILY--SSF54909, at 959,514 to 960,315
16105
mRNA_7738: 16106 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 960,464 to 961,733
16106
mRNA_7739: 16107 - K20476 RIC1 RAB6A-GEF complex partner protein 1, at 962,010 to 966,625
16107
mRNA_7740: 16108 - HMMPfam-Kinetochore complex Sim4 subunit Fta1-PF13092, at 966,858 to 968,054
16108
mRNA_7741: 16109 - Hypothetical Protein, at 968,367 to 969,216
16109
Group
Condition
mRNA
_7737
mRNA
_7738
mRNA
_7739
mRNA
_7740
mRNA
_7741
16105
16106
16107
16108
16109
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.5
-2.6
-0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.9
+0.2
-0.1
-0.6
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.7
-2.0
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
+0.1
-1.7
+0.0
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.3
+0.4
-0.3
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
-0.1
-1.1
+0.2
-0.8
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.1
-0.7
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.1
-0.2
-1.6
+0.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.1
-0.1
-0.4
+0.0
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.1
-0.4
+0.2
+0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.9
+0.4
-0.6
-0.3
-0.1
growth on oleic acid
YNB Oleic Acid
+0.5
-0.5
-0.1
-0.1
+0.6
growth on ypd
YPD
-0.9
+0.7
-0.1
-0.1
+1.0
ypd buoyancy
40 hrs High Buoyancy
+0.6
-0.1
-0.2
+0.0
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.2
+0.6
-1.0
-0.4
+0.4
auxotrophy
YNB Glucose
-0.3
+0.4
-0.5
+0.1
+1.1
ypd buoyancy
40 hrs Median Buoyancy
+0.7
+0.6
-0.0
-0.2
-0.2
auxotrophy
Dropout Complete
+0.3
+0.2
-0.1
+0.0
+0.7
growth on oleic acid
YNB Glucose
+0.5
+0.2
-0.1
+0.2
+0.6
ypd buoyancy
40 hrs Low Buoyancy
+0.7
+0.4
+0.5
-0.3
+0.3
growth on ricinoleic acid
YNB Glucose
+1.1
+0.8
-0.1
-0.0
+0.4
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