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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16107 and 16108 are separated by 232 nucleotides
16108 and 16109 are separated by 312 nucleotides
16109 and 16110 are separated by 239 nucleotides
16110 and 16111 are separated by 441 nucleotides
mRNA_7739: 16107 - K20476 RIC1 RAB6A-GEF complex partner protein 1, at 962,010 to 966,625
16107
mRNA_7740: 16108 - HMMPfam-Kinetochore complex Sim4 subunit Fta1-PF13092, at 966,858 to 968,054
16108
mRNA_7741: 16109 - Hypothetical Protein, at 968,367 to 969,216
16109
mRNA_7742: 16110 - KOG3630 Nuclear pore complex, Nup214/CAN component, at 969,456 to 971,369
16110
mRNA_7743: 16111 - K09569 FKBP2 FK506-binding protein 2, at 971,811 to 972,530
16111
Group
Condition
mRNA
_7739
mRNA
_7740
mRNA
_7741
mRNA
_7742
mRNA
_7743
16107
16108
16109
16110
16111
facs on lipid accumulation
Sorted No BODIPY Gate
-2.6
-0.1
-0.2
N.D.
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.0
-0.2
-0.1
N.D.
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-1.7
+0.0
-0.5
N.D.
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.6
+0.2
N.D.
-1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.6
+0.3
-0.4
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.1
+0.2
-0.8
N.D.
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.0
-0.4
+0.4
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.7
-0.1
+0.3
N.D.
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.3
-0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.0
-0.5
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
-0.2
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.3
-0.7
N.D.
+0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.2
+0.6
N.D.
-0.4
auxotrophy
Dropout Complete
-0.1
+0.0
+0.7
N.D.
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.5
-0.3
+0.3
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
+0.4
N.D.
+0.2
auxotrophy
YNB Glucose
-0.5
+0.1
+1.1
N.D.
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
+0.6
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.0
+0.3
N.D.
+0.5
growth on oleic acid
YNB Glucose
-0.1
+0.2
+0.6
N.D.
+0.2
growth on ypd
YPD
-0.1
-0.1
+1.0
N.D.
+0.5
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