Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16108 and 16109 are separated by 312 nucleotides16109 and 16110 are separated by 239 nucleotides16110 and 16111 are separated by 441 nucleotides16111 and 16112 are separated by 285 nucleotides mRNA_7740: 16108 - HMMPfam-Kinetochore complex Sim4 subunit Fta1-PF13092, at 966,858 to 968,054 16108 mRNA_7741: 16109 - Hypothetical Protein, at 968,367 to 969,216 16109 mRNA_7742: 16110 - KOG3630 Nuclear pore complex, Nup214/CAN component, at 969,456 to 971,369 16110 mRNA_7743: 16111 - K09569 FKBP2 FK506-binding protein 2, at 971,811 to 972,530 16111 mRNA_7744: 16112 - Hypothetical Protein, at 972,816 to 973,446 16112
Group Condition mRNA_7740 mRNA_7741 mRNA_7742 mRNA_7743 mRNA_7744
16108 16109 16110 16111 16112
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.2 N.D. -1.0 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 N.D. +0.1 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.1 N.D. -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 N.D. -0.4 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.5 N.D. -0.3 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.6 N.D. -0.4 -0.7
auxotrophy Dropout Complete +0.0 +0.7 N.D. -0.5 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 N.D. -0.3 +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 N.D. +0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.4 N.D. +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.7 N.D. +0.5 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.8 N.D. +0.7 +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.3 N.D. -0.1 +0.8
auxotrophy YNB Glucose +0.1 +1.1 N.D. -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.4 N.D. +0.4 +0.5
growth on oleic acid YNB Oleic Acid -0.1 +0.6 N.D. +0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.3 N.D. +0.5 +0.2
growth on oleic acid YNB Glucose +0.2 +0.6 N.D. +0.2 +0.2
growth on ricinoleic acid YNB Glucose -0.0 +0.4 N.D. +0.2 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.5 N.D. +0.3 +1.6
growth on ypd YPD -0.1 +1.0 N.D. +0.5 +0.3
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