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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16122 and 16123 are separated by 526 nucleotides
16123 and 16124 are separated by 770 nucleotides
16124 and 16125 are separated by 801 nucleotides
16125 and 16126 are separated by 859 nucleotides
mRNA_7754: 16122 - Hypothetical Protein, at 989,641 to 993,184
16122
mRNA_7755: 16123 - Hypothetical Protein, at 993,711 to 994,662
16123
mRNA_7756: 16124 - Hypothetical Protein, at 995,433 to 996,390
16124
mRNA_7757: 16125 - Hypothetical Protein, at 997,192 to 998,453
16125
mRNA_7758: 16126 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 999,313 to 1,000,093
16126
Group
Condition
mRNA
_7754
mRNA
_7755
mRNA
_7756
mRNA
_7757
mRNA
_7758
16122
16123
16124
16125
16126
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.5
-0.2
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-1.4
+0.1
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.3
-0.2
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.2
+0.0
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.3
-0.1
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.5
+0.5
+0.1
N.D.
-0.5
auxotrophy
YNB Glucose
-0.3
-0.2
+0.1
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
+0.1
-0.3
N.D.
-0.6
growth on ricinoleic acid
YNB Glucose
-0.2
-0.3
+0.1
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.1
-0.1
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
-0.1
N.D.
+0.3
auxotrophy
Dropout Complete
-0.2
-0.1
+0.1
N.D.
+0.3
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
-0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.0
+0.1
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.4
-0.1
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.5
-0.2
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.3
-0.3
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
+0.5
+0.3
N.D.
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
-0.4
+0.0
N.D.
+0.4
growth on oleic acid
YNB Glucose
+0.1
+0.3
+0.1
N.D.
+0.1
growth on ypd
YPD
+0.5
+0.7
+0.2
N.D.
-0.1
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