Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16127 and 16128 are separated by 1384 nucleotides16128 and 16129 are separated by 186 nucleotides16129 and 16130 are separated by 129 nucleotides16130 and 16131 are separated by 225 nucleotides mRNA_7759: 16127 - K11824 AP2A AP-2 complex subunit alpha, at 1,000,288 to 1,003,990 16127 mRNA_7760: 16128 - K05607 AUH methylglutaconyl-CoA hydratase, at 1,005,375 to 1,006,761 16128 mRNA_7761: 16129 - KOG1176 Acyl-CoA synthetase, at 1,006,948 to 1,009,515 16129 mRNA_7762: 16130 - K20302 TRAPPC3, BET3 trafficking protein particle complex subunit 3, at 1,009,645 to 1,010,524 16130 mRNA_7763: 16131 - HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062, at 1,010,750 to 1,013,184 16131
Group Condition mRNA_7759 mRNA_7760 mRNA_7761 mRNA_7762 mRNA_7763
16127 16128 16129 16130 16131
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.2 -0.2 -0.2 N.D. -0.2
growth on ypd YPD -1.7 +0.2 -0.2 N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.0 +0.2 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.6 -0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.3 -0.4 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.5 -0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 -0.3 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 -0.0 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.8 +0.1 -0.1 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.4 +0.3 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.2 +0.3 N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.4 +0.0 N.D. -0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.0 +0.1 N.D. +0.2
auxotrophy YNB Glucose -0.2 -0.0 +0.4 N.D. +0.1
growth on oleic acid YNB Glucose -0.1 +0.2 +0.2 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.5 +0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.0 +0.3 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.1 +0.3 +0.0 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 +0.4 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.2 +0.2 N.D. +0.2
auxotrophy Dropout Complete +0.2 +0.3 +0.4 N.D. +0.2
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